PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80156.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YC

Protein Properties

Length: 254aa MW: 28233.8 Da PI: 6.8922

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.3	3e-55	81	184	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+ee+krrtl+k+diaaa+trtdifdflvdiv PON80156.1 81 QLRTFWASQyqeIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEESKRRTLQKNDIAAAITRTDIFDFLVDIV 179 89***99889*********************************************************************************** PP NF-YC 97 prdel 101 pr++l PON80156.1 180 PREDL 184 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDQQGHRQRA AMAAVGSGAQ AQYGVNPYQS NKMMGPSSAG SVGLLQSPTQ PAGPSASPQL 60 AQHQLAYQHI HPQQQEQLQQ QLRTFWASQY QEIEQTSDFK NHSLPLARIK KIMKADEDVR 120 MISAEAPVIF ARACEMFILE LTLRSWNHTE ESKRRTLQKN DIAAAITRTD IFDFLVDIVP 180 REDLKDEVLA SVPRGSLPVP GPADGVPYYY ASPVGPPGMI VGKPVMDQAV YGQQTRSYMN 240 QPTWPHQQQP PNDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	160	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	4e-85	NF-YC family protein