PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON80168.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 195aa    MW: 21767.3 Da    PI: 8.4918
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON80168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik++
  PON80168.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEM 49
                89************************9...9******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKEMH QVLQSLESKK  60
RRKSLSPSPG PSPRQLVLPT TAPHIDSPLG LENQVKELGA CSNSPAADVE AKMSGSNVVL  120
KIISLRVTGQ IAKIISILER LSFEVLHLNV SSMEDTVLYS FVIKIGLECQ LSMEELVLEV  180
QRSIRSESSD TLYTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-77bHLH family protein