PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80313.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 1234aa MW: 138142 Da PI: 8.7134

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	145	180	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++ E e++++a +++G++ Wk++a + R+++++ PON80313.1 145 QWSKKELERFYEAYRKYGKD-WKKVATIIR-SRSAEMV 180 6***************99.******.999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1234 aa Download sequence
MPSNCHSSSS SSSSSSSSIS TDLIIITIII VIVSTNSIAA LLVRSTSQNV EAILIGFLLS 60 VWLLRKFRIE PERLRNFEDL ILIWLVSMMS FDGTLRKFVM APSRKSRNGN KRFSRVNEVY 120 PNKPGGNANK SRQKKRKLSD MLGPQWSKKE LERFYEAYRK YGKDWKKVAT IIRSRSAEMV 180 EALYSMNRAY LSLPEGTASV VGLVAMMTDH YCILGVSDSD QESSEAGGEF REPQKCTRGK 240 FQNSTYKGSE GHLPDFSQSN SVGSRDGCLS LLKKRRSGII PHAVRKRTPR INVPHADKDN 300 SEKYHLKLNI DAPNDDVAHE IMALTEASKR IGSPQVSQMP NRKVKAATLP SLRNGRRRCA 360 APEMTSGKLC STKFHDGGSE LSLQSTEVVN GDYDRTKSYL MGRECAVTED SQEKGKNYHV 420 KKVEVEDGVN YCLDDVKEAY GGRGERKQNA VKRRIRTEVV NESPRSLSKG SGKRSRKSLF 480 GGDEDSPFGA LQALADLSLM MPEEIADTVS VVEDTASRAS KLVYAKGDTC ESNAGIQKRK 540 QKFLTSQLQI HENELQADAH RSDNQKIEAT DEAKTFVLKG KHSSHNSSSL QQKLVKPLDL 600 TSSDAIYKGK VNDSVLLTTE VSPVNQLNIP TKSRSRRKMD KRKSLVTKDM KKFEKVLDDQ 660 PNLRIPLFCD TGVNLKEALS NCLSQYQVRR WCAFEWFYSA IDCPWFAKSE FVEYLNHVGL 720 GHVSRLTRVE WGVIRSSLGR PRRFSKNFLK EEKEKLNQYR ESVRTRYAEL HAGTKEGLPT 780 DLALPLSVRQ RVVAIHPRTR EIQDGTVLTV DDSRYHVQFD RPDLGVEYVM DIDCMPLNPM 840 ENMPASLTSH NFVVNNPFVT FNVLKINEHL KEGKTEEYIK VASSENIDNA DNHYLFQSTH 900 DIGEDLRHKE GDSLHSKVQA KFGPCETTTQ SKANPQPSLL AQIRAKEADV QALTELTRAL 960 DKKEAVVFEL RHMNDEVLEN QKDGDSSLRN SESFKKQYAA ALLQLNEVNE QVSSALLCLR 1020 KRNTYQGISP ATLSNPLSTL NDPDGRSSCL RFSAYNTQEC GSRVAEIVES SKIKARKVVG 1080 AAMQAMSSLE KMGNKLETIE EAMDFVNDQL SEEDFDMPAV RSSTYRDKVK ANSEESPGAS 1140 IPLATCRTPD PELNGLPNQS EPKALSELIA DCVATAFMIQ SCTERQFPPA EVAQVLDSAV 1200 TSLHPHCPQN LPVYEDLQKL MGIIRTKILA LIPA

Sequence ? help Back to Top

Protein Sequence Length: 1234 aa Download sequence

MPSNCHSSSS SSSSSSSSIS TDLIIITIII VIVSTNSIAA LLVRSTSQNV EAILIGFLLS  60
VWLLRKFRIE PERLRNFEDL ILIWLVSMMS FDGTLRKFVM APSRKSRNGN KRFSRVNEVY  120
PNKPGGNANK SRQKKRKLSD MLGPQWSKKE LERFYEAYRK YGKDWKKVAT IIRSRSAEMV  180
EALYSMNRAY LSLPEGTASV VGLVAMMTDH YCILGVSDSD QESSEAGGEF REPQKCTRGK  240
FQNSTYKGSE GHLPDFSQSN SVGSRDGCLS LLKKRRSGII PHAVRKRTPR INVPHADKDN  300
SEKYHLKLNI DAPNDDVAHE IMALTEASKR IGSPQVSQMP NRKVKAATLP SLRNGRRRCA  360
APEMTSGKLC STKFHDGGSE LSLQSTEVVN GDYDRTKSYL MGRECAVTED SQEKGKNYHV  420
KKVEVEDGVN YCLDDVKEAY GGRGERKQNA VKRRIRTEVV NESPRSLSKG SGKRSRKSLF  480
GGDEDSPFGA LQALADLSLM MPEEIADTVS VVEDTASRAS KLVYAKGDTC ESNAGIQKRK  540
QKFLTSQLQI HENELQADAH RSDNQKIEAT DEAKTFVLKG KHSSHNSSSL QQKLVKPLDL  600
TSSDAIYKGK VNDSVLLTTE VSPVNQLNIP TKSRSRRKMD KRKSLVTKDM KKFEKVLDDQ  660
PNLRIPLFCD TGVNLKEALS NCLSQYQVRR WCAFEWFYSA IDCPWFAKSE FVEYLNHVGL  720
GHVSRLTRVE WGVIRSSLGR PRRFSKNFLK EEKEKLNQYR ESVRTRYAEL HAGTKEGLPT  780
DLALPLSVRQ RVVAIHPRTR EIQDGTVLTV DDSRYHVQFD RPDLGVEYVM DIDCMPLNPM  840
ENMPASLTSH NFVVNNPFVT FNVLKINEHL KEGKTEEYIK VASSENIDNA DNHYLFQSTH  900
DIGEDLRHKE GDSLHSKVQA KFGPCETTTQ SKANPQPSLL AQIRAKEADV QALTELTRAL  960
DKKEAVVFEL RHMNDEVLEN QKDGDSSLRN SESFKKQYAA ALLQLNEVNE QVSSALLCLR  1020
KRNTYQGISP ATLSNPLSTL NDPDGRSSCL RFSAYNTQEC GSRVAEIVES SKIKARKVVG  1080
AAMQAMSSLE KMGNKLETIE EAMDFVNDQL SEEDFDMPAV RSSTYRDKVK ANSEESPGAS  1140
IPLATCRTPD PELNGLPNQS EPKALSELIA DCVATAFMIQ SCTERQFPPA EVAQVLDSAV  1200
TSLHPHCPQN LPVYEDLQKL MGIIRTKILA LIPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein