PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80325.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YB

Protein Properties

Length: 178aa MW: 20279.9 Da PI: 8.312

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	162.8	4.8e-51	45	139	3	97
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +++r+lPianv+rimk++lP nakisk+aket+qecvsef+sfvt+easdkc++e+rkt+ngdd++wala lGf+dy+ p+k yl++yre e ++ PON80325.1 45 QEQRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFVSFVTGEASDKCRKERRKTVNGDDVCWALAALGFDDYAGPMKRYLHRYREQEIDR 139 5789**************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MYCSYFFSLQ YLIWRRNMVD NSNNITGAAS SKINGSEGVI KSLDQEQRLL PIANVGRIMK 60 QILPPNAKIS KEAKETMQEC VSEFVSFVTG EASDKCRKER RKTVNGDDVC WALAALGFDD 120 YAGPMKRYLH RYREQEIDRA IQEKARSSAQ ANHNLRLNEA NRHLRGSIDE VNDGTEVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	2e-54	NF-YB family protein