PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON80438.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 161aa    MW: 18073.3 Da    PI: 4.8549
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON80438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.41.5e-14591431496
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 +r  +p kfa+++ +k ++s +++le ++gr W+ ++++     ++ +++  l +GW+ F+ +n+L++gD+++F+l+ + +++  ++v
  PON80438.1  59 RRPPVPFKFATRNIKK-NRS-DVILELPDGRFWSAECKIrnlddKGLPKSAGLYSGWSAFAMENNLEVGDVCIFELVTT-TEKISFRV 143
                 55668999**999444.454.8***************99555544444449999*********************9874.44345544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MVHYDKLPIK SPEPTQLEIS SDSDDETPIL GSPDFPTEQA AGGISTTQTY PKQEAVQRRR  60
PPVPFKFATR NIKKNRSDVI LELPDGRFWS AECKIRNLDD KGLPKSAGLY SGWSAFAMEN  120
NLEVGDVCIF ELVTTTEKIS FRVFIERLAD DAYHQLYSSG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-09B3 family protein