PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON80525.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 292aa    MW: 33105.9 Da    PI: 5.1171
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON80525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.88e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+ eEd++l+ +v+++G  +W+  ++  g+ R++k+c++rw +yl
       PON80525.1 14 RGAWSSEEDDKLKAYVERYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61
                     89******************99************************97 PP
2Myb_DNA-binding58.61.4e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE+ l++++++++G++ W+ Ia++++ gRt++++k++w+++l
       PON80525.1  67 RGNYTAEEESLIIKLHEEHGNK-WSMIAAKLP-GRTDNEIKNHWHTHL 112
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MVRAPFYDKY GVKRGAWSSE EDDKLKAYVE RYGHWNWREL PKFAGLSRCG KSCRLRWMNY  60
LRPDVKRGNY TAEEESLIIK LHEEHGNKWS MIAAKLPGRT DNEIKNHWHT HLEKRSKFTH  120
HDDDPDQKPK KSETKDLYSS EYSSGGDRNS HGESEAQSNS SATAPPDIAG LSPQILESSQ  180
YSHTETTSST STGSSSSTSS SSTSRATDEL VSTTNSTNDV SEDSTTHHDP SKLEKLSIQD  240
QYCGGDFWTE PFLDDNNVMS IQNEYYPACF AEEGILSSYN ISFYDEGMDY LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-57MYB family protein