PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80537.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 364aa MW: 40645.4 Da PI: 5.203

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+++++++G+g+W+ ++ g+ R++k+c++rw +yl PON80537.1 14 KGPWTPEEDLMLINYIQKHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.1	3.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +v+++ lG++ W++Ia++++ gRt++++k++w+++ PON80537.1 67 RGRFSFEEEETIVQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDLMLINYIQ KHGPGNWRNL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIVQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHAPRL DFLDLSSILA SSSLCNPSLF NLSSLFGTQA LFNPELLRLA STLLSLNNKQ 180 DKNINPEWFN SQNLQENQLC SNQVQNQIPP LVQPNINHDQ FQTPIPEGFS MQPNVTNLIS 240 SSSTPISTQE NVNTSAINPS SGLNENVAVS QPSYLDCGSN TNNPSVVAEL PENSFFQSLL 300 DGYSDQVFGF DSVISTPSSL TPLNSSSTYN VSSTSSTEDE REISYCSSLL KFEIPESLDI 360 NDFL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDLMLINYIQ KHGPGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIVQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHAPRL DFLDLSSILA SSSLCNPSLF NLSSLFGTQA LFNPELLRLA STLLSLNNKQ  180
DKNINPEWFN SQNLQENQLC SNQVQNQIPP LVQPNINHDQ FQTPIPEGFS MQPNVTNLIS  240
SSSTPISTQE NVNTSAINPS SGLNENVAVS QPSYLDCGSN TNNPSVVAEL PENSFFQSLL  300
DGYSDQVFGF DSVISTPSSL TPLNSSSTYN VSSTSSTEDE REISYCSSLL KFEIPESLDI  360
NDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-95	MYB family protein