PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON80993.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 210aa    MW: 22424.8 Da    PI: 8.2313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON80993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-18756255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + g
  PON80993.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDQAARIMCG 56
                69******9.**********8.....334**********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDQA ARIMCGPKAR  60
TNFPYNPNEP HSNSSKLLSD TLRAKLQKCN VASLQMTKQP LPKEPHVAHY SSLNLTTTTA  120
PATSAAGIAG NGVGIGGAWP EGNWVGLGES NGQGSSTSSN SSSSSSGGGG GGGGGGGGQH  180
YYKPLEDDHI EQMIEELLDY GYMELSPGVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.16e-45ERF family protein