PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81394.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 317aa    MW: 34909.5 Da    PI: 7.0096
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.5e-10229272755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  PON81394.1 229 IAAKNRRERISERLKVLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 272
                 5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MALAKERSIL PHDPCMIMTS VLSPQAPYNL DHQDFHKPAN FDQEKSSTST TTSGNCGKNL  60
AINHSYETAF RAANNQAEDA QSVINFTGYV TNGSDDQSLL SFDQQIIGQR ASNHKEDYYS  120
ATNPDQSYPW NNHNPRFSSD FNCFQTASDK GNQHGGDGSY GWLYSEATVI TDSFEESGAQ  180
ESAAGFHKRP HMGESTTPAV KKQCTSSTTA TNKKPKVQKS SPSKDPQSIA AKNRRERISE  240
RLKVLQELVP NGSKVDLVTM LEKAISYVKF LQLQVKVLAT DEFWPVQGGK APDISQVKEA  300
IDAILSSQKD RTSSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-53bHLH family protein