PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81549.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 207aa    MW: 24196.2 Da    PI: 4.6937
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM965.7e-3091301128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 lppGf+F+Ptdeelv ++L +k+ + +++  ++i+++d+ ++ +Pw+++ ++ ++ k +yfFsk+        r+ rat++gyWk+   ++++++ +g+
  PON81549.1   9 LPPGFQFRPTDEELVLHFLYPKAFRLPCNHPNIIPDLDLDHLhHPWEFDGTALSSGKMYYFFSKT--------REDRATSNGYWKELDINEPIFV-SGN 98 
                 79*************************999999*****977549****96555666777888764........6789******************.999 PP

         NAM  99 lvglkktLvfy..kgrapkgektdWvmheyrl 128
                 +v +kk Lvfy   ++ +++++t+Wvm+ey+l
  PON81549.1  99 KVAVKKYLVFYvfGESPSSASETNWVMEEYSL 130
                 9**********7545677789*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGDDQSVKLP PGFQFRPTDE ELVLHFLYPK AFRLPCNHPN IIPDLDLDHL HHPWEFDGTA  60
LSSGKMYYFF SKTREDRATS NGYWKELDIN EPIFVSGNKV AVKKYLVFYV FGESPSSASE  120
TNWVMEEYSL CNNVGLNITT SPAYKRRRKQ KIDLKWVLCR VHERKDDTIT RQSIRYEDDD  180
DGTELSCLDE MFLSSLDDDL EEISMQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.18e-56NAC family protein