PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81629.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB
Protein Properties Length: 307aa    MW: 34735.9 Da    PI: 7.5016
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed++l+d++k +G g W+  +++ g++R++k+c++rw++yl
       PON81629.1 14 RGAWSAMEDKILADYIKIHGEGKWRDLPQRAGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding51.81.9e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ +t+E++l+v+++k+lG++ W++Ia +++ gRt++++k++w++ 
       PON81629.1  67 RGNISTDEEDLIVRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNTN 111
                      7899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGRKPCCEKE GLNRGAWSAM EDKILADYIK IHGEGKWRDL PQRAGLKRCG KSCRLRWLNY  60
LRPNIRRGNI STDEEDLIVR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNT NLRKRVLDNN  120
SIKGQSSSEE PVKPATERTQ LTAQHSSCHV IRTKAVRCSK VVVPSLLLLD DKYQNMTGQS  180
QHSAPLKKIS DQSKSSPTTT TTSSSDHNVN SSDFLFDFDI DEFLVSNDIV LDPDNVVDNH  240
RAAKDRHGEI INGIDQIGGC FDDIHEYFSV SNRFDQVPQG LDVDLNEISC FGNPGGEDYQ  300
RRIGAWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.17e-65MYB family protein