PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81631.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 291aa MW: 32805.1 Da PI: 8.271

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+t Ed++l+d+vk +G g W+ +++ g++R++k+c++rw++yl PON81631.1 14 RGAWSTMEDKILADYVKIHGEGKWRDLPQRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	51.9	1.7e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +t+E++l+v+++k+lG++ W++Ia +++ gRt++++k++w++ PON81631.1 67 RGNISTDEEDLIVRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MGRKPCCEKE GLNRGAWSTM EDKILADYVK IHGEGKWRDL PQRAGLKRCG KSCRLRWLNY 60 LRPNIRRGNI STDEEDLIVR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNT NLRKRVLDNI 120 GIKGQSSSEE LVKPATKRTQ LTAQQSSGHV IRTKAVRCSK VAIPSWLLLD DQDKNIIGQN 180 SVPLKEILSD QSKSRSFSSS TTTSENVNSS DFLIDFDFGK VLMSDDIDHQ AKDRTGKSIG 240 PSSVDQIARC SFDDIYDPYL LVGDPFYQGL DDLDEISCFL NSGGEDQLVI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-65	MYB family protein