PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81676.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 167aa MW: 18710.1 Da PI: 6.6264

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	159.2	6.2e-50	5	99	3	97
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 eqdr+lPianv+rimk++lP akisk+ k+t+qec++efisfvt+easdkc++e+rktingdd++wal+ lGf++y+e + yl+kyre+e++k PON81676.1 5 EQDRLLPIANVGRIMKQILPPTAKISKEGKQTMQECATEFISFVTGEASDKCHKENRKTINGDDICWALSALGFDNYAEVIVRYLHKYREAERDK 99 8********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MVDPEQDRLL PIANVGRIMK QILPPTAKIS KEGKQTMQEC ATEFISFVTG EASDKCHKEN 60 RKTINGDDIC WALSALGFDN YAEVIVRYLH KYREAERDKA NQMSKGNNNI GPPHPTTINT 120 TTHADQDKVI GDSDHDIHSR STSTTTPTLM EFKIIEKGDH NSLMKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	2e-55	NF-YB family protein