PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81815.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 677aa MW: 73572 Da PI: 6.8979

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.8	5.1e-28	234	287	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl PON81815.1 234 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 287 79*****************.******************************8 PP
2	Myb_DNA-binding	40.5	6.5e-13	236	286	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ PON81815.1 236 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLTRENVASHLQKFR 286 678**********************************************97 PP
3	Response_reg	75.8	1.5e-25	51	159	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++++q+l++ +y v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ Ga PON81815.1 51 VLVVDDDTTCLRIVEQMLRRCHY-LVTTCSQATFALKLLRERKgcFDVVLSDVHMPDMDGYKLLEHVGLEM-DLPVIMMSADGRTSAVMKGIRHGAC 145 89*******************.***************************************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON81815.1 146 DYLIKPIREEELKN 159 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MAALQRVAQS SLSTAGSSYA LCKAGLGSST CAAPVVDEKV ASDEFPVGLK VLVVDDDTTC 60 LRIVEQMLRR CHYLVTTCSQ ATFALKLLRE RKGCFDVVLS DVHMPDMDGY KLLEHVGLEM 120 DLPVIMMSAD GRTSAVMKGI RHGACDYLIK PIREEELKNI WQHVVRKKWN ENKDFENSGS 180 LEDNDRNKCV NDDTDYASSV NEETEGLKGQ KKRSNNKEED DCELENDDPS TSKKPRVVWS 240 VELHQQFVSA VNQLGLDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGGVTQQQ 300 NGISSTFCGS VEPNVKLASL GRFDIQALAA SGQIPPQTLA ALHAELLGRP AGNLMPTLDQ 360 PPLLHASMQG PKRMTVEHGL AFGQPLVKCQ PNIFKQFPQS ILSVDDASSR YGVWTSNGLG 420 TVGPSNNVGG LNNSNSNLLM GVLQRQQQQQ QKQQPQLQQQ SLLPEPSRSI NVQPSCLVVP 480 SQSSASFQAG SPVSVNQNSN FNRNSVIDYS ILSPHSNNSA LSVGHISNGD IKTSGILCGY 540 SAPSSSSTMS SGSLNADNST SQQNSAVTNG DARQLPRLVP NIADIQGSYG AKSGEMLDQG 600 PLRNLGFVGK GTCIPSRFAV DEFELPMNNL NHGNVHSENH GNPVKQEPSM DFTNNAKVGV 660 PVMRQFPSND LMSVFTK

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MAALQRVAQS SLSTAGSSYA LCKAGLGSST CAAPVVDEKV ASDEFPVGLK VLVVDDDTTC  60
LRIVEQMLRR CHYLVTTCSQ ATFALKLLRE RKGCFDVVLS DVHMPDMDGY KLLEHVGLEM  120
DLPVIMMSAD GRTSAVMKGI RHGACDYLIK PIREEELKNI WQHVVRKKWN ENKDFENSGS  180
LEDNDRNKCV NDDTDYASSV NEETEGLKGQ KKRSNNKEED DCELENDDPS TSKKPRVVWS  240
VELHQQFVSA VNQLGLDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGGVTQQQ  300
NGISSTFCGS VEPNVKLASL GRFDIQALAA SGQIPPQTLA ALHAELLGRP AGNLMPTLDQ  360
PPLLHASMQG PKRMTVEHGL AFGQPLVKCQ PNIFKQFPQS ILSVDDASSR YGVWTSNGLG  420
TVGPSNNVGG LNNSNSNLLM GVLQRQQQQQ QKQQPQLQQQ SLLPEPSRSI NVQPSCLVVP  480
SQSSASFQAG SPVSVNQNSN FNRNSVIDYS ILSPHSNNSA LSVGHISNGD IKTSGILCGY  540
SAPSSSSTMS SGSLNADNST SQQNSAVTNG DARQLPRLVP NIADIQGSYG AKSGEMLDQG  600
PLRNLGFVGK GTCIPSRFAV DEFELPMNNL NHGNVHSENH GNPVKQEPSM DFTNNAKVGV  660
PVMRQFPSND LMSVFTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-121	ARR-B family protein