PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82461.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 361aa    MW: 40943.3 Da    PI: 5.1223
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY902e-28134194259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp ++eitY+g+H+++
  PON82461.1 134 DDGYSWRKYGQKDILGAKYPRSYYRCTFRntqSCWSTKQVQRSDDDPYLFEITYRGTHTCS 194
                 8**************************998889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEGSWSWEQK TLISELIQGM DLAKQLKQNL CAKSSPETRD FLVQRILSSY EKALLILKWS  60
GSMGQPHQPL GVATGMCVPE SPISINESPR SDDFERGLKD HQDLRDSSKK RKTLPRWTDQ  120
VRVSSENGLE GPQDDGYSWR KYGQKDILGA KYPRSYYRCT FRNTQSCWST KQVQRSDDDP  180
YLFEITYRGT HTCSQASNSV PPPTSPEKQD QKPNNHNVIP QQQQFEHSNP KFPSNLRVIT  240
EDLEHRQVVE SPFSFPSTSY GCMKSEDSFT PLVLDTETFT GGFSQSFISP ATPESNYYTL  300
SPFQMNNPAA FHNVQRSESE HTEIVSANTS ATNSPIPELD FPLDPVDIDP NFPFDTPGFF  360
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104112LRDSSKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-75WRKY family protein