PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82486.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 342aa    MW: 38263.9 Da    PI: 5.3314
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-19129179155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  ++ a+ +l+g
  PON82486.1 129 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDSAAIQLRG 179
                 59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MNRGGPVVKF SEHRNQTKLT TKEFHPQTTP SQAPEMVRPR IVRVSVTDGD ATDSSSDEED  60
RHGNTQKPIS RRRVKKFVNE ITIESSPCST RESSDAVWRS RSSRKRSSVR TKVPAATHRS  120
LKTTATSEKK FRGVRQRPWG KWAAEIRDPL RRVRLWLGTY DTAEEAAMVY DSAAIQLRGP  180
DALTNFATPP LPAKSSPENK PAVSSGYYSG DESHNNQNLC SPTSVLRCPS PSNEEADSLG  240
SKETSRDIGD TRDESCVSEN FSEFSEHSSF ESFIPDDIFD FQSSIPDFFD ETSQRDGIFG  300
RDFSDIFAET SWDFGSASKA FQVDDYFQDI GDLFSSDPLV AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-65ERF family protein