PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82730.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Nin-like
Protein Properties Length: 250aa    MW: 28715.9 Da    PI: 9.0381
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK23.98.4e-08153180330
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclT 30 
                 ++i l+dl+kyF+lpi +A+++L+v+lT
  PON82730.1 153 ARIALSDLAKYFDLPIVEASRNLKVGLT 180
                 6899**********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MRMLCILLEY ATTSVCGGSH KSNVNDGGDV TILIIQFYHP PPLLTCIPSL LTLSRNPKLR  60
AIPSLANDLE TIFHMICVTD DKEPSRVLSE RTCQRNNQNH HQLRRNVPVL DQDLNCLPYP  120
VTPSELSDDQ QIEQSSSGTM EKKKKRATSK DIARIALSDL AKYFDLPIVE ASRNLKVGLT  180
EEREWQQQDN KAAAMAVAKR QRMLENERES IEKKPFWEMK TETKRFRQDV FKRKHRARVL  240
GTQSLFLPDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-45Nin-like family protein