PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82741.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 311aa MW: 34394.8 Da PI: 6.5102

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.7	3e-21	117	177	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e+++ l +++e++V++WFqNrRa+ k+ PON82741.1 117 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKEITSDLsqhgQISETNVYNWFQNRRARSKR 177 89***************99************************************97 PP
2	Wus_type_Homeobox	101	8.3e-33	116	179	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+ L+++G+i+++NV++WFQNr+aR+++kq PON82741.1 116 ARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRARSKRKQ 179 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MMGLGVVGWE KQQQQEEAEQ NGNGNGNVVG NGNGNGNGNG NGSNNSNNGG GIPYVKVMTD 60 EQLETLRKQI AAYATICEQL VQMHKNLTSH PDLPGVRLGN LYCDPLMTSA GHKITARQRW 120 TPTPVQLQIL ERIFDQGNGT PSKQKIKEIT SDLSQHGQIS ETNVYNWFQN RRARSKRKQH 180 NNNNNNSTTN PSNAESEVDT EVESPKDKKT KPPADEFHSS SSSQHNSAPP RPDDICFQST 240 PEMITSDLHF FDPHPHPHPN TALRPPRNLA QLPFYDGLLS NPTRNDQLSG KMEVPGSYGL 300 YEHAEDYSMA G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	179	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-88	WOX family protein