PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82906.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 466aa MW: 51521.3 Da PI: 5.9517

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	68.6	2.1e-21	55	105	8	58
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 + ++hTkv+gR RRvRl+a+c +F L++eLG+ +d++t++WLl q p PON82906.1 55 KGDRHTKVDGRHRRVRLPATCCPGIFRLTRELGHRSDGETVQWLLSQLRPD 105 679*******************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDAKQEELCQ EETMDANQQP KATAMAPASF EGDPLLEIQV QPQDQGLLLQ PRRLKGDRHT 60 KVDGRHRRVR LPATCCPGIF RLTRELGHRS DGETVQWLLS QLRPDLVLPH RPHSSRSRRP 120 KPTGPVNGEN GLNDMAVPRP VVRATVVQAS TVFYDTPATL DKAERLIASA AAYGSQLVVF 180 PEAFVGGYPH SVMFNAVKES HLTNDNEYQK YYASAINVPG PEVDRLANIA DKYSVHLVIG 240 VVERVELLLF STVLYFDTMG RYLGKCRKLL PLASETAVWC GEENSSLPVY ETTIGKIGGL 300 VCWDNRMPHL RTELYAKGVE IYCAPTAEAR EVWRASMTHI ALEGGCFVLS ANQFYRRNNY 360 PLPPEEYVSG DSNGDASLDT VLCSGGSLIV SPSGTILAGP NYQGESLISA DLDLSEIARA 420 KLEFSGAEHT ARPNYASWIT KSYNADSFPC PVKTEVIDEL HWKSTE

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDAKQEELCQ EETMDANQQP KATAMAPASF EGDPLLEIQV QPQDQGLLLQ PRRLKGDRHT  60
KVDGRHRRVR LPATCCPGIF RLTRELGHRS DGETVQWLLS QLRPDLVLPH RPHSSRSRRP  120
KPTGPVNGEN GLNDMAVPRP VVRATVVQAS TVFYDTPATL DKAERLIASA AAYGSQLVVF  180
PEAFVGGYPH SVMFNAVKES HLTNDNEYQK YYASAINVPG PEVDRLANIA DKYSVHLVIG  240
VVERVELLLF STVLYFDTMG RYLGKCRKLL PLASETAVWC GEENSSLPVY ETTIGKIGGL  300
VCWDNRMPHL RTELYAKGVE IYCAPTAEAR EVWRASMTHI ALEGGCFVLS ANQFYRRNNY  360
PLPPEEYVSG DSNGDASLDT VLCSGGSLIV SPSGTILAGP NYQGESLISA DLDLSEIARA  420
KLEFSGAEHT ARPNYASWIT KSYNADSFPC PVKTEVIDEL HWKSTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	8e-20	TCP family protein