PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82968.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 201aa    MW: 21315.6 Da    PI: 9.5487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-1987138256
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+++AeIrd      ++ +r++lg+f taeeAa a+++a+ +++g+
  PON82968.1  87 HYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFETAEEAALAYDRAAFRMRGA 138
                 8********.**********....33236**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MVLASASSAQ IQNELPLNEN DSQDMVIYQV LNEASMSLNA TSFLPHRLHQ ITTTSSSNSI  60
TTQSVSSGLG ATGLHQVPVR NIAMKKHYRG VRRRPWGKYA AEIRDSARHG ARVWLGTFET  120
AEEAALAYDR AAFRMRGAKA LLNFPAEVVA AAAAATAAAS HAQRVIQENG SGNNSSDSAV  180
TSRSESESST STGEGGTRPG V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.18e-32ERF family protein