PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82983.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 558aa MW: 60880.3 Da PI: 7.1814

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.8	8.1e-18	265	314	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq PON82983.1 265 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 314 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MELSQPRPYG TEGRKPTHDF LSLYSHSTAQ QDPRPPSQGS YLKTHDFLQP LEQVGNTCAK 60 EETSVEISTA EKPPPPAPPP VEHVLPGGIG TYSISHISYF NQIQRVPKPE GMVFSVAQAS 120 STDRNDENSN CSSYTGSGFT LWEEPAVKKG KTGKENMGDK SGVLEPAARV GQWASSERPS 180 QSSSNNHRGS FSSLSSSQPS GQRNQSFMEM IKSAKGSSHE EELEEEDQFV LKKEASTATT 240 TTPQRGELRV KVDGKSSDQK ANTPRSKHSA TEQRRRSKIN DRFQMLRELI PHSDQKRDKA 300 SFLLEVIEYI QFLQEKVQKY EGSYQGWNNE PTKLIPWRNN HRVGESFDHS QGLNGASGPP 360 LVFATKFDEK NIAVSPTVPG NAQNLVESDT STATITNKGM TFPVSLQSNF FSPVRNGGAL 420 PQTPPRLRPD VENSSSQPHS QLCQTRSCTT VDGAIASDKL KEEELTIEGG TISISTAYSQ 480 GLLNTLTQAL QSSGVDLSQA SISVQIELGK RASGLTAAAT SITKDNEIPS NNQGVKHSRV 540 ATGDDCDQAQ KKLKTGKN

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MELSQPRPYG TEGRKPTHDF LSLYSHSTAQ QDPRPPSQGS YLKTHDFLQP LEQVGNTCAK  60
EETSVEISTA EKPPPPAPPP VEHVLPGGIG TYSISHISYF NQIQRVPKPE GMVFSVAQAS  120
STDRNDENSN CSSYTGSGFT LWEEPAVKKG KTGKENMGDK SGVLEPAARV GQWASSERPS  180
QSSSNNHRGS FSSLSSSQPS GQRNQSFMEM IKSAKGSSHE EELEEEDQFV LKKEASTATT  240
TTPQRGELRV KVDGKSSDQK ANTPRSKHSA TEQRRRSKIN DRFQMLRELI PHSDQKRDKA  300
SFLLEVIEYI QFLQEKVQKY EGSYQGWNNE PTKLIPWRNN HRVGESFDHS QGLNGASGPP  360
LVFATKFDEK NIAVSPTVPG NAQNLVESDT STATITNKGM TFPVSLQSNF FSPVRNGGAL  420
PQTPPRLRPD VENSSSQPHS QLCQTRSCTT VDGAIASDKL KEEELTIEGG TISISTAYSQ  480
GLLNTLTQAL QSSGVDLSQA SISVQIELGK RASGLTAAAT SITKDNEIPS NNQGVKHSRV  540
ATGDDCDQAQ KKLKTGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-135	bHLH family protein