PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83312.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 238aa    MW: 28231.2 Da    PI: 7.037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.6e-0884129555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er RR++ ++++  L ++lP       +K++K +i++ A+  I++L+
  PON83312.1  84 HMMNERMRREKQKQSYLALHSMLPMG-----TKNDKNSIVQIATMKIQQLE 129
                 889*********************97.....7999999******9999995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDVFFPEEYF SGDTLWCCEN IPANRSAFEP YREKPRNGFV QENAFYGSKK MNMNKRMIEF  60
WRRRSWNKYE NNEGEHEKER CFRHMMNERM RREKQKQSYL ALHSMLPMGT KNDKNSIVQI  120
ATMKIQQLER YKEELRQQNM ELEEILAGGN EEEIKTKWTK IKLKVANPTS GVDSMVEVLN  180
CLKKLGLKAR NIHSAFSAQE FSAELEIETK VGATEIEEAM QQTLIEAEWK LRPHFEEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.17e-46bHLH family protein