PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83343.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 225aa    MW: 25669.4 Da    PI: 4.6189
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-1892142255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  PON83343.1  92 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 142
                 69*******.**********422...25*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MQMESSFFNS QTSDLSSESS FGSPEPFSWE NLHNFAENSL PFNENDSEEM LLYGLLSNTS  60
RETFSDTVSR SPNKEEEVNS MSEEEISRKE KSYRGVRRRP WGKFAAEIRD STRHGIRVWL  120
GTFDSAEAAA LAYDQAAFSM RGPSAILNFP VERVRESLRE LNYGAAAEEE EEEGCSPVVA  180
LKRKHSMRRK IVNKKSKERD VRIENVVVFE DLGAEYLEEL LTTSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-70ERF family protein