PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83345.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 140aa    MW: 15341.8 Da    PI: 7.5111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-211363255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+++AeIrd +    + +r++lg+fgtaeeAa+a+++a+ +++g
  PON83345.1 13 KYRGVRRRP-WGKFAAEIRDSTR---HgARVWLGTFGTAEEAARAYDRAAYAMRG 63
                8********.**********422...25*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MDQEKDNSGG GVKYRGVRRR PWGKFAAEIR DSTRHGARVW LGTFGTAEEA ARAYDRAAYA  60
MRGPLAILNF PEEYPLANPG QSSSSTSATF SSSTSSMRVA GSSSSSSSSQ QGKQVIEFEY  120
LDDKLLEELL DYDDKNNKKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.14e-19ERF family protein