PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83348.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 227aa    MW: 25676.9 Da    PI: 4.9754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.3e-1078126354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RR+r+N++f  L ++l +    + +K +K +iL  Av+ +++L
  PON83348.1  78 GTKACREKLRRERLNDRFLDLSSVLEPG---RPTKTDKPAILDDAVRVLNQL 126
                 57889**********************8...89****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MDSLDDGTCW DLFDYSFTNT PSTDFLWPNQ SVMDIDFLGG GGGNDGNGEV DGDGALQEKE  60
EKEYPRKRGR TDSCSKQGTK ACREKLRRER LNDRFLDLSS VLEPGRPTKT DKPAILDDAV  120
RVLNQLKSEA KELKETNEKL LEEIKSLKAE KNELREEKLV LKADKEKMEQ QLKTMAMSPS  180
GYMPAHPAAY QNKMAVFPGY SLVPMWNYLP PSTRDTSRDH ELRPPAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16571PRKRGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-74bHLH family protein