PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83595.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 123aa    MW: 14158.2 Da    PI: 9.0768
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.7e-09550346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+   +l+ +a + + ++   +W+  ar +g g+t +++k ++ +
       PON83595.1  5 SWTAKQNKLFENALAIYDKDtpdRWHNMARAVG-GKTVEEVKRHYEM 50
                     7********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MASSSWTAKQ NKLFENALAI YDKDTPDRWH NMARAVGGKT VEEVKRHYEM LVEDVNKIET  60
GQIPLPNYRK INNKAYNPYM DEEQSCHGGG FGTVQGGKSR IKLCFLDENV GKKEVMMIKR  120
FER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.16e-37MYB_related family protein