PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83620.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 228aa    MW: 25565.7 Da    PI: 9.9755
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.89.3e-141422271198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE- CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfr 98 
                  ++  +v+p+  +  +g++   +k+++l+  +++ W+v ++ +k+ gr v+t++W eF +an+LkegD++vF l+  ++ +++e+ v++++
  PON83620.1 142 ASLYSVVIPRIVL--IGIN--IGKEIKLRYGNNKFWTVGIT-SKSHGRGVITTNWVEFRRANNLKEGDMCVFDLVvgKDnTCKEMIVSIID 227
                 4555678888887..4544..6789***************5.666677899**********************765445577778887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MARPTISFPK LEEDGPEFFK VFMPTFSSQN MVKQIEEKLC FTRGWEGFVS KYKLERGDFL  60
LFKSIGNSSF GVKIYAKNGC KKELAAVMNN IINHDPIPNG KMKEGSSSGL GEDKSNIKIG  120
GTDQYVPPKN LRFVVTLHNT RASLYSVVIP RIVLIGINIG KEIKLRYGNN KFWTVGITSK  180
SHGRGVITTN WVEFRRANNL KEGDMCVFDL VVGKDNTCKE MIVSIIDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.18e-13B3 family protein