PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84123.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family M-type_MADS
Protein Properties Length: 94aa    MW: 10712.2 Da    PI: 9.3767
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.13.6e-161150745
                HHHHHHHHHHHHHHHHHHHHHHH.HHT-EEEEEEE-TTSE CS
      SRF-TF  7 snrqvtfskRrngilKKAeELSv.LCdaevaviifsstgk 45
                sn  v+fskRr+g++ KA EL++  Cda++a++i+s+tg+
  PON84123.1 11 SNIFVSFSKRRKGLFQKATELCTtFCDAQIAIVILSTTGN 50
                6778******************549*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MEEQQKQAQA SNIFVSFSKR RKGLFQKATE LCTTFCDAQI AIVILSTTGN PFSFGHSSVD  60
DVLRHYLGKT TIGPPNFITD EQRHQIQRIE RLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01530.15e-20M-type_MADS family protein