PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84761.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 225aa    MW: 24710.7 Da    PI: 9.3417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-114691454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h+e ErrRR riN  +++Lr++lP++      K++Ka++L ++++ +++L
  PON84761.1 46 KHSESERRRRMRINGQYATLRTILPNL-----IKMDKASVLAETIRRVREL 91
                79************************9.....6************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MNFFQGFQGC RNSNASSKQN SLNLGVIPIC KPKLKADRAK QLAAHKHSES ERRRRMRING  60
QYATLRTILP NLIKMDKASV LAETIRRVRE LKKAVEEVEE VCCTVPDVDD ELSLEVGEDH  120
EEAAGLVVLI KATLSCDDRP GLMLELINAL KSVKGGVELI RVVKAEMVTA GGRTKTVLWL  180
RRIGAGSGGG GGGYEHEHDD DNEAILVMLR RALKVVLAKR ANGKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-30bHLH family protein