PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84895.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 662aa MW: 71436.2 Da PI: 4.3687

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.1	1.5e-11	20	61	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+WT +E +ll++a +++ + W+ Ia+++ ++t qc++++ PON84895.1 20 GKWTDQETLLLLEALELYKEN-WNEIAEHVA-TKTKAQCILHFV 61 89***************88.*****.********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MSSSDFILME PGEVPGLSGG KWTDQETLLL LEALELYKEN WNEIAEHVAT KTKAQCILHF 60 VQMPIEDTFL DLDDDIDSSS KEAADPASSD KGSLAPKDAA ETTEAETAAN ENQSTTTPME 120 TSKEETTEVK ASQDTLKAED KDNLMVDQET SKLVDSSESN GGQDTGENCA MKALKEAFEA 180 VGYPLTPEGP HSFAEVGNPV MALAAFLGHL VGPDVATASA HNSLKSISGS SPGIELAARH 240 CFLLEDPPND DKEPAGLPSI VAETTIGETQ KEETLEDKSQ KEDLSNDHSG EKNQDSVLEE 300 KRTLDASNIE HETPEKSDDA KEQDIVIACE EAHGSLNTSN KSSTSEIIKD QPPSTLMGSV 360 DLKSGAELLP SSVKESEVKS GEPPEPTKIS KDVEMAEPVP SEKNELQQTV SSNVKEPTDS 420 ADTLDQVGVL ADSLPLKKTG HQQPEISSSV GKPPSEAPRG IDMVAHSEHS EKNEPSQPSE 480 PNATVEKRAI DDHTKDGNIK NHTEIKEDDK IDKIKRAAVS AISAAAVKAK LLANQEEDQI 540 RQLSTLLIEK QMQKLETKLG FFNEMENVLM RVREQLDRSR QRLYHERAQI IAARLGLPAS 600 SSRVPPSSVP TNRIGMNVAS SVPRPPLGMV PQRPPMSRPM GTEAPTPSIP LSTTTTGSQM 660 QG

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MSSSDFILME PGEVPGLSGG KWTDQETLLL LEALELYKEN WNEIAEHVAT KTKAQCILHF  60
VQMPIEDTFL DLDDDIDSSS KEAADPASSD KGSLAPKDAA ETTEAETAAN ENQSTTTPME  120
TSKEETTEVK ASQDTLKAED KDNLMVDQET SKLVDSSESN GGQDTGENCA MKALKEAFEA  180
VGYPLTPEGP HSFAEVGNPV MALAAFLGHL VGPDVATASA HNSLKSISGS SPGIELAARH  240
CFLLEDPPND DKEPAGLPSI VAETTIGETQ KEETLEDKSQ KEDLSNDHSG EKNQDSVLEE  300
KRTLDASNIE HETPEKSDDA KEQDIVIACE EAHGSLNTSN KSSTSEIIKD QPPSTLMGSV  360
DLKSGAELLP SSVKESEVKS GEPPEPTKIS KDVEMAEPVP SEKNELQQTV SSNVKEPTDS  420
ADTLDQVGVL ADSLPLKKTG HQQPEISSSV GKPPSEAPRG IDMVAHSEHS EKNEPSQPSE  480
PNATVEKRAI DDHTKDGNIK NHTEIKEDDK IDKIKRAAVS AISAAAVKAK LLANQEEDQI  540
RQLSTLLIEK QMQKLETKLG FFNEMENVLM RVREQLDRSR QRLYHERAQI IAARLGLPAS  600
SSRVPPSSVP TNRIGMNVAS SVPRPPLGMV PQRPPMSRPM GTEAPTPSIP LSTTTTGSQM  660
QG