PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84930.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WOX
Protein Properties Length: 223aa    MW: 24971 Da    PI: 4.9105
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.7e-2187147257
                 T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                 r+R+++t+ ql++Le+ Fe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  PON84930.1  87 RQRWSPTTLQLQILERIFEEgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 147
                 89*****************99**************************************97 PP
2Wus_type_Homeobox99.72.2e-3286149265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RW+Pt+ Q++iLe+++++G  tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
         PON84930.1  86 ARQRWSPTTLQLQILERIFEEGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 149
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEEENPKKEG VVGAGAGGAA AGLYVKVMTD EQMELLRRQI SVYSTICEKL AEMHKAISAQ  60
HDLSGMKLGA LHCDPLMAYA GHKITARQRW SPTTLQLQIL ERIFEEGNGT PSKQKIKEIT  120
SELSQHGQIS ETNVYNWFQN RRARSKRKQS VPAPNNMEQE AEAETEFLKD STKPEDIEFY  180
DNSAPRDHDV YFPSPEELIS WSANGSVMEL QPVALWGGFD VGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141149RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.17e-69WOX family protein