PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85043.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 198aa    MW: 22800.6 Da    PI: 5.3639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.5e-081242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia +++ gRt++++k++w+++l
       PON85043.1  1 WSLIAGRIP-GRTANDVKNYWNTHL 24
                     *********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
WSLIAGRIPG RTANDVKNYW NTHLRKKVMS FDKLKHVKKT DEKVINVKSN IIKPRPRTFT  60
KQLPLMNKNI NGTTIASNNT TLPRDVNTVS EPPVLEETKY WWESLLDDSE ADNQGFVNSI  120
ISNGLDWEPN ITNFSMELES DQQLPEPKIR ENNASTSSIF VEDGHKKFWT DFIMDMEMNL  180
WDPTSTSADK EMQSNNVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56650.12e-17MYB family protein