PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85303.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 539aa    MW: 60122.8 Da    PI: 6.1405
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.92.8e-1121605381374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn......sseelaalklfsevsPilk 92 
                 lv+lL++cAeav+ +d++ a+ lL++l+ +a   g+++qR+a++f+++La rla  +  + +  ++p + ++++      s+++  al+l +e++P ++
  PON85303.1 160 LVQLLIACAEAVACRDKSHASVLLSELRANALVFGSSFQRVASCFVQGLADRLAMvHPLGAVGFIAPAPPPTMSimdvgiSEKKEEALRLVYEICPHIQ 258
                 689***************************************************933334555567777666667779988888899999********* PP

        GRAS  93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                 f+h++aN  Ilea+e+e+ vH++D++++    +G QW aL+q+La+R+   ++p +lRiT+vg       e+ + +g+ L+ fA++lgv++ef+v v +
  PON85303.1 259 FGHFVANASILEAFEEESFVHVVDLGMTlglpHGHQWRALIQSLADRAtthQPPRRLRITAVGL----CDERFRIIGDELELFANNLGVNLEFSV-VKT 352
                 ************************98873333788************99866677*********....9*************************9.799 PP

        GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                 +le+l+ ++++++ +E+laVn++lqlh +++es    +   +vL+++ +l Pkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +  r+
  PON85303.1 353 HLENLSSNDIKTSDDEVLAVNSILQLHCVVKESRGALN---SVLQTIHELGPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRA 448
                 ******************************88877777...8********************************************************* PP

        GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF++ p++  +++qak  l++++  +gy++ ee+g+lvlgWk+rp+v++S+W+
  PON85303.1 449 KMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAGPIK--MMAQAKQWLAQIEaCEGYTIVEEKGCLVLGWKSRPIVAASCWK 538
                 *********************************************96..789**********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MADIHRLLSK VYINGERTKE VGDHELSLSA MACYPFPYMP LLENRGYTLI LPFPDENREH  60
KRIKRVPSLP ESISSSATPT PYRGGGNIND SNDTSNSCIS RCSSTSSLSS MPSLQFRDHI  120
LTYTQRYLAA EVVEEAAEAI MGANQENRGI EDGEADEMRL VQLLIACAEA VACRDKSHAS  180
VLLSELRANA LVFGSSFQRV ASCFVQGLAD RLAMVHPLGA VGFIAPAPPP TMSIMDVGIS  240
EKKEEALRLV YEICPHIQFG HFVANASILE AFEEESFVHV VDLGMTLGLP HGHQWRALIQ  300
SLADRATTHQ PPRRLRITAV GLCDERFRII GDELELFANN LGVNLEFSVV KTHLENLSSN  360
DIKTSDDEVL AVNSILQLHC VVKESRGALN SVLQTIHELG PKVLVLVEQD SSHNGPFFLG  420
RFMEALHYYS AIFDSLDAML PKYDTRRAKM EQFYFAEEIK NIISCEGPAR VERHERVDQW  480
RRRMSRAGFQ AGPIKMMAQA KQWLAQIEAC EGYTIVEEKG CLVLGWKSRP IVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-75GRAS family protein