PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85476.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 71aa    MW: 8539.13 Da    PI: 9.8146
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-11853247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     g+WT+eEd +l+    ++G ++W t +r +  ++++ qc++rw+k 
       PON85476.1  8 GKWTEEEDVILKAMAMEFGEDQWVTLSRDLLFRKSPMQCRDRWYKI 53
                     89*****************************779**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MRMMAKGGKW TEEEDVILKA MAMEFGEDQW VTLSRDLLFR KSPMQCRDRW YKIKAELKLI  60
PSRKIFSQLL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.11e-13MYB family protein