PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON85605.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 386aa MW: 41192.2 Da PI: 9.271

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON85605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.8	5.5e-39	82	142	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nkk++ PON85605.1 82 PEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNK 142 67899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MVFSSIPVYL DPPNWHQQQN HHHQLVNSVI STESPQLPPL PPPQLQPHVV GGGGGSGSGS 60 GPGSIRPGSM ADRARLAKIP QPEAALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW 120 TRGGALRNVP VGGGCRRNKK NKSNNSNNNS RSKSPAGNSA DQNKQTAGGG GGGAGSSSSN 180 STGGGLINPS AEIIGHLQQV PQLSHNSSFM ASLQNLTRFG SGSGNLGLNF STADQIQAGQ 240 TDLEFQIGSE ADQWRLQQFP LLGGHHDFES PTGNLYPFQG STNTTTTDHH HHQAAASGMD 300 VGDDTTSNII LRTNMSSPGS RVSQFPPVKI EDRRGGGLNL LRPNLGISSE DNHNNYWGPN 360 RTTSSTAWTA DLSALNSSTS TTHHLL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MVFSSIPVYL DPPNWHQQQN HHHQLVNSVI STESPQLPPL PPPQLQPHVV GGGGGSGSGS  60
GPGSIRPGSM ADRARLAKIP QPEAALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW  120
TRGGALRNVP VGGGCRRNKK NKSNNSNNNS RSKSPAGNSA DQNKQTAGGG GGGAGSSSSN  180
STGGGLINPS AEIIGHLQQV PQLSHNSSFM ASLQNLTRFG SGSGNLGLNF STADQIQAGQ  240
TDLEFQIGSE ADQWRLQQFP LLGGHHDFES PTGNLYPFQG STNTTTTDHH HHQAAASGMD  300
VGDDTTSNII LRTNMSSPGS RVSQFPPVKI EDRRGGGLNL LRPNLGISSE DNHNNYWGPN  360
RTTSSTAWTA DLSALNSSTS TTHHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	6e-40	Dof family protein