PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON85643.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 269aa MW: 30563.2 Da PI: 8.5884

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON85643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.1	3.3e-32	192	250	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PON85643.1 192 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 250 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MASTSQAMLN QGLFEDQEAP PQMGFFSFPP NSGSLTLIPP LGCLKTFSSS TTTTSTLLPC 60 IPTLNNNSNI NNNISETLLS SLSTATTTYS KHRDHHDDQD HLPSSAYHFG SGPQLLSLQR 120 STSNLWSWGE VNDCLGSKRS SIINGGESDH QYHDHHHHHL GLSTMKMKKI KGRRKVREPR 180 FCFKTMSEVD VLDDGYKWRK YGQKVVKNTQ HPRSYYRCTQ DNCRVKKRVE RLAEDPRMVI 240 TTYEGRHVHS PSHDLEDSQA PSPLNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	6e-62	WRKY family protein