PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86197.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 235aa    MW: 26055.2 Da    PI: 6.5065
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.33.6e-083252346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
       PON86197.1  3 RWSVIASQLP-GRTDNDVKNYWNT 25
                     4*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVRWSVIASQ LPGRTDNDVK NYWNTKLKKK LLAGKMSLIT TNTSSNPIPT STSTTTDHLI  60
SGLKPSFQPP ILVPKLQTLP ENSSLSCPNS LTAPLRMISA DINYNVPGLS VYDQRLSFNN  120
SVMDFSDHQF DHVNSKKNRD IINGLLSQEV LSISHSSNSI VPASDHHIQH NNLKRASILP  180
EISGCDEYSD GTTTLMDFEF GLSPYDNIVN DVSFEEKAAY NSMSLADHQS IINHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.16e-14MYB family protein