PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86198.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 91aa    MW: 10373.9 Da    PI: 9.0551
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.5e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+ + + +G+g +W + +r+ g++R++k+c++rw++yl
       PON86198.1 14 RGPWSPEEDATLKTYLETHGTGgNWIALPRKAGLRRCGKSCRLRWLNYL 62
                     89**********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDATLKTYLE THGTGGNWIA LPRKAGLRRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDHIIC NLYNQMGSRQ V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.15e-55MYB family protein