PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON86205.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 404aa MW: 46135.9 Da PI: 6.7393

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON86205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.5e-09	332	366	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ PON86205.1 332 KWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 366 669*****************************885 PP
2	ELK	36.7	9.2e-13	286	307	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL++LkqE+s PON86205.1 286 ELKNHLLRKYSGYLSGLKQELS 307 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MDQDYNQMDE NSGAARGNFL YSSGNMQGGN GNYGRGSHDH QLSTVNSFHL QSTAGAGGGD 60 HCSGFQSASS GPHQHHHQPI VKTEASTSHH HNHLIQKFHY PNLMTRDHHD QTVQQVHHDQ 120 LPQNHDHDHD HPHRSKEVEA IKAKIIGHPQ YSNLLEAYMD CQKVGAPAEV VARLGAARQD 180 FEARQRSSVS TRETSSKDPE LDQFMEAYYD LLVKYRDELT RPIQEAMDFM RRIETQLNML 240 SNGGPVRIFT SDHDKCEGVG SSEEDQDNSG GETEVPEIDP RAEDRELKNH LLRKYSGYLS 300 GLKQELSKKK KKGKLPKDAR QKLLSWWELH YKWPYPSETE KVALAESTGL DQKQINNWFI 360 NQRKRHWKPS EDMQFMVMDG LHPQNAALYM DGHYMGDGHY RLGP

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MDQDYNQMDE NSGAARGNFL YSSGNMQGGN GNYGRGSHDH QLSTVNSFHL QSTAGAGGGD  60
HCSGFQSASS GPHQHHHQPI VKTEASTSHH HNHLIQKFHY PNLMTRDHHD QTVQQVHHDQ  120
LPQNHDHDHD HPHRSKEVEA IKAKIIGHPQ YSNLLEAYMD CQKVGAPAEV VARLGAARQD  180
FEARQRSSVS TRETSSKDPE LDQFMEAYYD LLVKYRDELT RPIQEAMDFM RRIETQLNML  240
SNGGPVRIFT SDHDKCEGVG SSEEDQDNSG GETEVPEIDP RAEDRELKNH LLRKYSGYLS  300
GLKQELSKKK KKGKLPKDAR QKLLSWWELH YKWPYPSETE KVALAESTGL DQKQINNWFI  360
NQRKRHWKPS EDMQFMVMDG LHPQNAALYM DGHYMGDGHY RLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-141	TALE family protein