PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON86268.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 531aa MW: 59222.7 Da PI: 6.1684

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON86268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20	1.2e-06	348	383	6	45
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45 +++Er+RR ri +++ +L++l P+ +k s a++Le PON86268.1 348 SIAERNRRTRISERIKKLQDLCPNM----DKQTSTADMLE 383 689*********************6....56788888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MSILYGPRFK CSEVELGKSY PEFMDNLSFG HGHHQMIQQQ SSTLTRYCSA PSSFMATLLE 60 NNDNDHSSDG LDGGSEDYYR DLRPSSPEVD TMLERFISAC NESENSGERT AMKQEPRDYS 120 INGSQVQVQA QAQAQPQAHQ IHSSHRNNSV DSAALVGSDL ETSFGVFSSV GLENSIQTKM 180 GPRNNRSDLG RQNSSPAGFF TDLAPENGLD KMRGGRRVDN QLNFSSCSAS NSRRMPQIAE 240 NGNEDLEMEN GNESNSHYIP NFRSDSWDES AFNGLKRSRD PNDVNMFSTS TELEMQNTEF 300 GNSSRGLTHH LSLPATFERA PREKVLHFQG TVPCKMRAKR GYATHPRSIA ERNRRTRISE 360 RIKKLQDLCP NMDKQTSTAD MLEYRAVTSA YYRGAVGAML VYDITKRQSF DHVARWLDEL 420 RGHADKNIVI MLVGNKSDLG TLRAVPIEDA KEFAQRESLF FMETSALEST NVESAFLTVL 480 TEIYRVVSKK ALIANDEQEP VGSSSLLKGT KIVVPGQEPA PVGSYSCCKY S

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MSILYGPRFK CSEVELGKSY PEFMDNLSFG HGHHQMIQQQ SSTLTRYCSA PSSFMATLLE  60
NNDNDHSSDG LDGGSEDYYR DLRPSSPEVD TMLERFISAC NESENSGERT AMKQEPRDYS  120
INGSQVQVQA QAQAQPQAHQ IHSSHRNNSV DSAALVGSDL ETSFGVFSSV GLENSIQTKM  180
GPRNNRSDLG RQNSSPAGFF TDLAPENGLD KMRGGRRVDN QLNFSSCSAS NSRRMPQIAE  240
NGNEDLEMEN GNESNSHYIP NFRSDSWDES AFNGLKRSRD PNDVNMFSTS TELEMQNTEF  300
GNSSRGLTHH LSLPATFERA PREKVLHFQG TVPCKMRAKR GYATHPRSIA ERNRRTRISE  360
RIKKLQDLCP NMDKQTSTAD MLEYRAVTSA YYRGAVGAML VYDITKRQSF DHVARWLDEL  420
RGHADKNIVI MLVGNKSDLG TLRAVPIEDA KEFAQRESLF FMETSALEST NVESAFLTVL  480
TEIYRVVSKK ALIANDEQEP VGSSSLLKGT KIVVPGQEPA PVGSYSCCKY S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	7e-36	bHLH family protein