PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86526.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NF-YB
Protein Properties Length: 146aa    MW: 17226.9 Da    PI: 8.6269
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB147.13.9e-461811797
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                mkk++P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfe+yv plkvyl+kyre+egek
  PON86526.1  1 MKKMIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFENYVGPLKVYLEKYREIEGEK 81
                9*****************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MKKMIPGNGK ISKDAKETVQ ECVSEFISFV TGEASDKCQR EKRKTINGDD IIWAITTLGF  60
ENYVGPLKVY LEKYREIEGE KLNIPKQQRT DQQRLQHHQQ QQQHFDQQEQ IGWKYLLFKC  120
LGLRIQIPCS VTPLFFFFFI LVFHLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.12e-52NF-YB family protein