PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86672.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NZZ/SPL
Protein Properties Length: 389aa    MW: 41758.8 Da    PI: 8.2028
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE20.95.9e-0729813482
      NOZZLE 34 eirte.tkksrgrkpgsktaq...qkqkkptlrgmgvaklerfiieeekkklv 82
                e+ t    k+rgrk   k +    ++ kk   rg+gva+ler +++e  kk++
  PON86672.1 29 ELGTSsGAKTRGRKTSNKGGTgapNNPKKQPQRGLGVAQLERLRLQERWKKMT 81
                666665789*****988865422267788889******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MSSSLRLNMA SDEWAPFQPE TTTTTTKPEL GTSSGAKTRG RKTSNKGGTG APNNPKKQPQ  60
RGLGVAQLER LRLQERWKKM TEMPHQLHSP PPPPPQALNF PAAAPADYHH HLLMSHYYFQ  120
NPAHHHHHEP LESVPVQYGA GSYGVAVNGS VAVAQCHGGT DRCLGMVHHH HQRMGHVATS  180
GFGCGSSSSS FPSSPAAGVM DHRSVTVDPH HHQYCYGRGN GIDINGAPSP DQMFLHHETS  240
KELSSMPKMQ PCFVTSDLCS KKKRFNGGNI GGVRGDIKCP EILQFCGLNG SNSEYHVPNS  300
TGSDQLTLGL GTTAARSIMT NEGVEVVAVH RKGNSVSGGV VLMEYEFFPG KNDSCSSTGS  360
KKASVSVMPG GEASYYDMIS NPVDLSLTL