PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON86893.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 244aa MW: 27714.2 Da PI: 7.3443

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON86893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.5	5.7e-35	22	113	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF +++F+kg+k++l++i+ PON86893.1 22 FLLKTYMLVEDPATDDVISWNTEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDKFRKGEKDQLCDIR 109 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PON86893.1 110 RRKA 113 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MEGVCDQKGL LEYMRKSTPP PFLLKTYMLV EDPATDDVIS WNTEGTAFVV WQPAEFARDL 60 LPTLFKHSNF SSFVRQLNTY GFRKVATNRW EFCNDKFRKG EKDQLCDIRR RKAWANNNKQ 120 QSAALTQAAA AASPAGQESD EDQRSSSTSS SSEFTTLVDE NKRLKKENGV LSSELTSMKN 180 KCKELLDLVA KYAHSEKEEE DDGHDQRPKL FGVRLEVEGE MEKKRKRAQV LSESASILLS 240 QACK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	4e-66	HSF family protein