PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87003.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ARR-B
Protein Properties Length: 571aa    MW: 63130 Da    PI: 6.215
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like60.43.8e-19308359254
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                  r +W p LH++F  a++ L G +kA Pkti + m+v+ +t  +v+SHLQkY+
  PON87003.1 308 SRAVWDPSLHRKFTTAISVL-GDKKAQPKTIQQEMNVPHITTRQVASHLQKYK 359
                 5999****************.9******************************8 PP
2Myb_DNA-binding26.31.7e-08311359348
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       W + ++ ++  a+  lG +  ++ktI ++m+  + t  q+ s++qky+
       PON87003.1 311 VWDPSLHRKFTTAISVLGDKkaQPKTIQQEMNvPHITTRQVASHLQKYK 359
                      7*****************99****************************7 PP
3Response_reg471.4e-16211261107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l+vd + + + +++ +le+  y +v+++ +++ al +++e++  + l++   +mp+md l +l+  ++  + +p+i+ +++ + e a +al  Ga 
    PON87003.1  21 ILLVDHDAISLVIMAAMLEQCSY-KVTTTNQASVALSMIRELEnhFRLVIANNNMPDMDMLSFLRASHQ--KGVPVILTSSERNAEVADRALAEGAC 114
                   89*********************.***************887777******************997666..55************************ PP

                   EEEESS--HHHH CS
  Response_reg  96 dflsKpfdpeel 107
                    +l+Kp+  +el
    PON87003.1 115 LVLTKPVTLDEL 126
                   ********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    
MEGMSDFVSK YVPSFARGLE ILLVDHDAIS LVIMAAMLEQ CSYKVTTTNQ ASVALSMIRE  60
LENHFRLVIA NNNMPDMDML SFLRASHQKG VPVILTSSER NAEVADRALA EGACLVLTKP  120
VTLDELKYLW QHACWKNVNL VEESVQQNCQ GKGTSGKEFG GIKINETITL PWSPLEGNMI  180
KQADRPPAEV KETKEAGGLS SSAIAHNVRE HVANDAKGKK KRTTRKSCII IDDQAKQSEN  240
TSLEELITAE SKTEEGSKAK VPIRDREGKK QEERSKLNSE LENSESSMII EKGKKRKRNT  300
DSSKDKSSRA VWDPSLHRKF TTAISVLGDK KAQPKTIQQE MNVPHITTRQ VASHLQKYKA  360
EVQKIQDNDT SLISTSKASN IHAISQFPPP LERQSSLLCQ MGHGNIDLGV TSNPWSSSYY  420
TNNTKEGNTI QVAKMNLPNL SYAPSKAASP CLPAGMVRLP GLHPQANQNQ DLASVFISKY  480
QNQPSVGVGN ATNSKTFETE GSQYIDAVVN QATAVGPSDH DQTLSEYDDI LRILEEDAED  540
FNYLSSGQTI DDFDKYCELL EKTLDAKDND L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.12e-24ARR-B family protein