PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87112.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CPP

Protein Properties

Length: 790aa MW: 87252.7 Da PI: 4.7033

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.8e-16	489	526	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YCeCfaag +C e C+C+dC Nk PON87112.1 489 CKRCNCKRSKCLKLYCECFAAGLYCVEPCSCQDCLNKP 526 79**********************************96 PP
2	TCR	51	2.9e-16	591	630	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs +C+C +CkN+ PON87112.1 591 RHKRGCNCRKSGCLKKYCECFQGGVGCSLSCRCMGCKNTF 630 589***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MNVDEEEEEE VRQSKLNIWD SPVFNYISNL SPIEPVKSGH NNHTFSSLTF ASPPSLFTSP 60 QISSFSETRF AIRRHQFSDP SKPESSQSEY ENKTSEGAQV ATQSEQLGCF NSGNSAREVT 120 NESSTENLEL AVEFPSTLKY DCGSPDGNFV PSDAVKADVM PELASTELSL VQFVADDSKE 180 GNCSFEREEN LRGICRVEEN NGMAGCSWVK VVSESNNIFG LDSPITGDHS DEQEPRMVDS 240 GTISFISNVL DDNLNDLGKT EFVCPTGSCE QFGMRESGVE SEGIGDTRET DQTPAMLSST 300 LLNKLVVSDS CDLVDEKRQK YIKSNCKPSS QLHRGIRRRS LVFERTETHE RKSICESKGS 360 SSGSIQSNYK VASADNDLVQ NKNGPSSLSK LPGIGLHLNA LANTNDGTIV KIETRGSESQ 420 QTSTPKMISN TSLTSDEVPQ DICSSDNTLE RALVTWDDEA QVLENAYQTS ECLVGEERKS 480 EPVGESLACK RCNCKRSKCL KLYCECFAAG LYCVEPCSCQ DCLNKPIHEN TVLETRKQIE 540 SRNPLAFAPK VIRSVDGVGE FGNGFSYESW HPFLARRYGE DDTKATPASA RHKRGCNCRK 600 SGCLKKYCEC FQGGVGCSLS CRCMGCKNTF GQKDGTEETE FDEPKPETYE KLVMDVSLET 660 FKDQDLLITS SEISRPPNEQ QPNLIRKILL PSLPSVESSH QFGNRENPEK TTLESHLQMI 720 PEDGTLETLE SSCQQTSSGV KSTSPNSKRV SPPYREFGSL TARRSGRKLI LRSIPAFPQL 780 STDHESSDFP

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MNVDEEEEEE VRQSKLNIWD SPVFNYISNL SPIEPVKSGH NNHTFSSLTF ASPPSLFTSP  60
QISSFSETRF AIRRHQFSDP SKPESSQSEY ENKTSEGAQV ATQSEQLGCF NSGNSAREVT  120
NESSTENLEL AVEFPSTLKY DCGSPDGNFV PSDAVKADVM PELASTELSL VQFVADDSKE  180
GNCSFEREEN LRGICRVEEN NGMAGCSWVK VVSESNNIFG LDSPITGDHS DEQEPRMVDS  240
GTISFISNVL DDNLNDLGKT EFVCPTGSCE QFGMRESGVE SEGIGDTRET DQTPAMLSST  300
LLNKLVVSDS CDLVDEKRQK YIKSNCKPSS QLHRGIRRRS LVFERTETHE RKSICESKGS  360
SSGSIQSNYK VASADNDLVQ NKNGPSSLSK LPGIGLHLNA LANTNDGTIV KIETRGSESQ  420
QTSTPKMISN TSLTSDEVPQ DICSSDNTLE RALVTWDDEA QVLENAYQTS ECLVGEERKS  480
EPVGESLACK RCNCKRSKCL KLYCECFAAG LYCVEPCSCQ DCLNKPIHEN TVLETRKQIE  540
SRNPLAFAPK VIRSVDGVGE FGNGFSYESW HPFLARRYGE DDTKATPASA RHKRGCNCRK  600
SGCLKKYCEC FQGGVGCSLS CRCMGCKNTF GQKDGTEETE FDEPKPETYE KLVMDVSLET  660
FKDQDLLITS SEISRPPNEQ QPNLIRKILL PSLPSVESSH QFGNRENPEK TTLESHLQMI  720
PEDGTLETLE SSCQQTSSGV KSTSPNSKRV SPPYREFGSL TARRSGRKLI LRSIPAFPQL  780
STDHESSDFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	2e-92	CPP family protein