PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87799.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 220aa    MW: 24142.1 Da    PI: 8.1279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.2e-213685255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a++aa+++l+g
  PON87799.1 36 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDAAALSLRG 85
                79*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MRRGGGKAID PSAAATSRLR EVEKRIESKS PLPEIKFRGV RKRPWGRFAA EIRDPWKKTR  60
VWLGTFDSAE EAARAYDAAA LSLRGPKAKT NFPSSPRDPI YHHHDERVSS KIDVIQASRP  120
TSSSLSSTVE SFSGPRVSAR PVVAQRPRCR PAVQPAQPDD DDCHSDCDSS SSVVDDCVLT  180
SSFRRILPFD LNLPPPPMDG PDLCDGGYAD DDIQATALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-21ERF family protein