PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87862.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 234aa    MW: 26714 Da    PI: 6.7897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.1e-08140187455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i+++++ L++l+P +    +k +  +++L + + Y++sLq
  PON87862.1 140 SHSLAERVRREKIKTKLSCLQDLVPGC----QKTMGLVMMLDEIISYVHSLQ 187
                 8*************************9....455999************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDQNITMNQF GELNSTMLES FNITDSLVEN LPGYKFPEYP LDLSYNFLDP SHSVHPNEFQ  60
ARTIDLTRDI SQVSKKMEAS ETSSEDVCSI ASAKLSKDYN KKTTKKNSLG AESKRSNERK  120
QDKPEEVIHV RAKRGKATDS HSLAERVRRE KIKTKLSCLQ DLVPGCQKTM GLVMMLDEII  180
SYVHSLQNQV EFLSRELEAA CSYQLGRNRR ALTNEQATGS HDSQEVEKWA REQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.21e-39bHLH family protein