PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88053.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 244aa    MW: 27758.6 Da    PI: 7.9788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1067117153
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 r++ h e+Er+RR+++ + f  Lr+llP  +   ++K s  +   +Av+YI  
  PON88053.1  67 RKVIHREIERQRRQEMTHLFVSLRSLLPLEF--IKGKRSIPDHINEAVRYIIL 117
                 6788*************************65..******************65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MFPIREGSDQ LSSTYVSFNP NENLLISEDL ILSQVSTDDV RNDNNTTGKG RRRKLTDQNS  60
TLHNEKRKVI HREIERQRRQ EMTHLFVSLR SLLPLEFIKG KRSIPDHINE AVRYIILLKK  120
KIEELEGRRN EKKFNLSKLD GSEVSGNSKS FPPSFFTISP SCGGIEIVIS SSDTESEGAL  180
PVSRVMKVLL EQGLGIFSCI STKVNANMIV HTIQSEVCDF TCIDQNELQQ RLSEVNLSLR  240
YMTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16679KRKVIHREIERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.19e-25bHLH family protein