PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88055.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 243aa    MW: 26837.4 Da    PI: 8.1137
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.39.8e-1255107155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +++ h  +Er+RR+++ + ++ Lr+l+P       ++K   ++    Av+YIk Lq
  PON88055.1  55 KKMIHRDIERQRRKEMATLYAGLRSLIPLeY---IKGKRATSDHMNGAVDYIKRLQ 107
                 5778*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVFHISTITT TSHQQNRIPQ DLIIPTSASV GGHNMGRGQP STKLLKGKED DDYKKKMIHR  60
DIERQRRKEM ATLYAGLRSL IPLEYIKGKR ATSDHMNGAV DYIKRLQMRI TDLGAQRDDL  120
IKKSNLRAPD SMSTSSGSSD NSSTLTSIVV HLCSAGGIEI VLSSSSSNNS TASTSFPLSR  180
VLQVLFEQGL DIVSCTTTKV NERVLLHTIQ AEVADDPTGI NCDQLQEEIK EIISSWNKDL  240
HSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-38bHLH family protein