PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88056.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 224aa    MW: 25398.6 Da    PI: 5.8822
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.6e-0873123254
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + +  e+Er+RR+++    + Lr+llP  +   ++K s  +   +Av+YI+++
  PON88056.1  73 KIMRRENERQRRQQMTFLTSSLRSLLPLEM--IKGKRSVCDHMHEAVNYINHM 123
                 667789**********************63..*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MFPFQQSDDL VPQISFNPHQ EDITQQDLVA LEQNYDYLPM NMGGGQPNNT IISTAPDHNN  60
DQPSTTCDNN ERKIMRRENE RQRRQQMTFL TSSLRSLLPL EMIKGKRSVC DHMHEAVNYI  120
NHMKTKIEAL IVMRDELKSR SDYSSAQATD HESGSSDTDY LNSVIVRPCW GGIEIVISVR  180
FPLSRVLEVL NKEGLNIAGC SSTKVNGTLI HTIQCEVRSL CINS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.12e-27bHLH family protein